From b1ff00e36bcaef93d7904d336129817944d05be2 Mon Sep 17 00:00:00 2001
From: Disassembler <disassembler@dasm.cz>
Date: Mon, 4 May 2020 11:04:29 +0200
Subject: [PATCH] Make Sahana Setup module compatible with Alpine containers,
 closes #311

---
 lxc-apps/safire/app                           |   4 +-
 lxc-apps/safire/install.sh                    |   2 +-
 lxc-apps/sahana-demo/app                      |   4 +-
 lxc-apps/sahana-demo/install.sh               |   2 +-
 lxc-apps/sahana/app                           |   4 +-
 lxc-apps/sahana/image                         |  16 +-
 .../image.d/etc/services.d/.s6-svscan/finish  |   1 +
 .../sahana/image.d/etc/services.d/atd/run     |   3 +
 lxc-apps/sahana/image.d/etc/sudoers.d/sahana  |   1 +
 lxc-apps/sahana/image.d/tmp/compat.patch      | 156 ------------------
 lxc-apps/sahana/image.d/usr/local/bin/migrate |  13 ++
 lxc-apps/sahana/install.sh                    |   2 +-
 lxc-apps/sambro/app                           |   4 +-
 lxc-apps/sambro/install.sh                    |   2 +-
 lxc-apps/share/app                            |   4 +-
 lxc-apps/share/install.sh                     |   2 +-
 16 files changed, 42 insertions(+), 178 deletions(-)
 create mode 100755 lxc-apps/sahana/image.d/etc/services.d/atd/run
 create mode 100644 lxc-apps/sahana/image.d/etc/sudoers.d/sahana
 delete mode 100644 lxc-apps/sahana/image.d/tmp/compat.patch
 create mode 100755 lxc-apps/sahana/image.d/usr/local/bin/migrate

diff --git a/lxc-apps/safire/app b/lxc-apps/safire/app
index 4afef19..a44797c 100644
--- a/lxc-apps/safire/app
+++ b/lxc-apps/safire/app
@@ -1,5 +1,5 @@
 {
-    "version": "0.0.1-200426",
+    "version": "1.0.3-200504",
     "meta": {
         "title": "Sahana Eden - SAFIRE",
         "desc-cs": "Řízení humanítární činnosti - Řešení nouzových událostí",
@@ -8,7 +8,7 @@
     },
     "containers": {
         "safire": {
-            "image": "sahana_0.0.1-200426",
+            "image": "sahana_1.0.3-200504",
             "depends": [
                 "safire-postgres"
             ],
diff --git a/lxc-apps/safire/install.sh b/lxc-apps/safire/install.sh
index 3d5c543..1d9b0e9 100755
--- a/lxc-apps/safire/install.sh
+++ b/lxc-apps/safire/install.sh
@@ -5,7 +5,7 @@ set -ev
 POSTGRES_DATA="${VOLUMES_DIR}/safire/postgres_data"
 SAHANA_DATA="${VOLUMES_DIR}/safire/sahana_data"
 SAHANA_CONF="${VOLUMES_DIR}/safire/sahana_conf"
-SAHANA_LAYER="${LAYERS_DIR}/sahana_0.0.1-200426"
+SAHANA_LAYER="${LAYERS_DIR}/sahana_1.0.3-200504"
 
 # Create Postgres instance
 install -o 105432 -g 105432 -m 700 -d ${POSTGRES_DATA}
diff --git a/lxc-apps/sahana-demo/app b/lxc-apps/sahana-demo/app
index 4ac2ea9..d4012e6 100644
--- a/lxc-apps/sahana-demo/app
+++ b/lxc-apps/sahana-demo/app
@@ -1,5 +1,5 @@
 {
-    "version": "0.0.1-200426",
+    "version": "1.0.3-200504",
     "meta": {
         "title": "Sahana Eden - Demo",
         "desc-cs": "Řízení humanítární činnosti - Demo instance",
@@ -8,7 +8,7 @@
     },
     "containers": {
         "sahana-demo": {
-            "image": "sahana_0.0.1-200426",
+            "image": "sahana_1.0.3-200504",
             "depends": [
                 "sahana-demo-postgres"
             ],
diff --git a/lxc-apps/sahana-demo/install.sh b/lxc-apps/sahana-demo/install.sh
index 03fa0cd..98a79c7 100755
--- a/lxc-apps/sahana-demo/install.sh
+++ b/lxc-apps/sahana-demo/install.sh
@@ -5,7 +5,7 @@ set -ev
 POSTGRES_DATA="${VOLUMES_DIR}/sahana-demo/postgres_data"
 SAHANA_DATA="${VOLUMES_DIR}/sahana-demo/sahana_data"
 SAHANA_CONF="${VOLUMES_DIR}/sahana-demo/sahana_conf"
-SAHANA_LAYER="${LAYERS_DIR}/sahana_0.0.1-200426"
+SAHANA_LAYER="${LAYERS_DIR}/sahana_1.0.3-200504"
 
 # Create Postgres instance
 install -o 105432 -g 105432 -m 700 -d ${POSTGRES_DATA}
diff --git a/lxc-apps/sahana/app b/lxc-apps/sahana/app
index 476dc00..47215e9 100644
--- a/lxc-apps/sahana/app
+++ b/lxc-apps/sahana/app
@@ -1,5 +1,5 @@
 {
-    "version": "0.0.1-200426",
+    "version": "1.0.3-200504",
     "meta": {
         "title": "Sahana Eden",
         "desc-cs": "Řízení humanítární činnosti",
@@ -8,7 +8,7 @@
     },
     "containers": {
         "sahana": {
-            "image": "sahana_0.0.1-200426",
+            "image": "sahana_1.0.3-200504",
             "depends": [
                 "sahana-postgres"
             ],
diff --git a/lxc-apps/sahana/image b/lxc-apps/sahana/image
index 3c374cd..ea1116b 100644
--- a/lxc-apps/sahana/image
+++ b/lxc-apps/sahana/image
@@ -1,9 +1,9 @@
-IMAGE sahana_0.0.1-200426
+IMAGE sahana_1.0.3-200504
 FROM alpine3.11-python3.8_3.8.2-200403
 
 RUN EOF
     # Install runtime dependencies
-    apk --no-cache add geos nginx py3-dateutil py3-gdal py3-lxml py3-numpy py3-pillow py3-psycopg2 py3-requests py3-sgmllib3k uwsgi-python3
+    apk --no-cache add ansible at geos nginx py3-dateutil py3-gdal py3-lxml py3-numpy py3-pillow py3-psycopg2 py3-requests py3-sgmllib3k py3-yaml uwsgi-python3 sudo
 
     # Install build dependencies
     apk --no-cache add --virtual .deps build-base freetype-dev git py3-numpy-dev py3-pip python3-dev ttf-dejavu
@@ -17,18 +17,19 @@ RUN EOF
     ln -s handlers/wsgihandler.py /srv/web2py/wsgihandler.py
 
     # Install Sahana
-    git clone --depth 1 https://github.com/sahana/eden.git /srv/web2py/applications/eden
+    git clone --recursive --depth 1 https://github.com/sahana/eden.git /srv/web2py/applications/eden
 
     # Install python dependencies, exclude old or unnecessary ones
     sed -i 's/^Pillow/#Pillow/' /srv/web2py/applications/eden/optional_requirements.txt     # We have 6.2.1, Sahana requires 6.2.2
-    sed -i 's/^ansible/#ansible/' /srv/web2py/applications/eden/optional_requirements.txt   # Needed for setup
     sed -i 's/^boto/#boto/' /srv/web2py/applications/eden/optional_requirements.txt         # Needed for setup on AWS
     sed -i 's/^PyRTF/#PyRTF/' /srv/web2py/applications/eden/optional_requirements.txt       # Ceased to exist
-    sed -i 's/^PyYAML/#PyYAML/' /srv/web2py/applications/eden/optional_requirements.txt     # Needed for setup
     sed -i 's/^openst/#openst/' /srv/web2py/applications/eden/optional_requirements.txt     # Needed for setup on OpenStack
     pip3 install -r /srv/web2py/applications/eden/optional_requirements.txt
     pip3 install translate-toolkit
 
+    # Hackfix paths for ansible and other modules with hardcoded paths
+    ln -s /srv/web2py /home/prod
+
     # Copy fonts with Czech glyphs
     cp /usr/share/fonts/ttf-dejavu/DejaVuSerif-Bold.ttf /srv/web2py/applications/eden/static/fonts/Helvetica-Bold.ttf
     cp /usr/share/fonts/ttf-dejavu/DejaVuSerif.ttf /srv/web2py/applications/eden/static/fonts/Helvetica.ttf
@@ -44,13 +45,14 @@ RUN EOF
 
     # Patch web2py for python 3.8
     cd /srv/web2py
-    patch -p0 </tmp/compat.patch
+    patch -p0 </srv/web2py/applications/eden/private/eden_deploy/roles/common/files/_compat.patch
+    cd /srv/web2py/gluon
+    patch -p0 </srv/web2py/applications/eden/private/eden_deploy/roles/common/files/scheduler.diff
 
     # Cleanup
     apk --no-cache del .deps
     find /srv/web2py -name '.git*' -exec rm -rf {} +
     rm -r /root/.cache
-    rm /tmp/compat.patch
 EOF
 
 CMD /bin/s6-svscan /etc/services.d
diff --git a/lxc-apps/sahana/image.d/etc/services.d/.s6-svscan/finish b/lxc-apps/sahana/image.d/etc/services.d/.s6-svscan/finish
index f0bc617..71d6fbc 100755
--- a/lxc-apps/sahana/image.d/etc/services.d/.s6-svscan/finish
+++ b/lxc-apps/sahana/image.d/etc/services.d/.s6-svscan/finish
@@ -1,4 +1,5 @@
 #!/bin/execlineb -P
 
+foreground { s6-svwait -d -t 3000 atd }
 foreground { s6-svwait -d -t 3000 nginx }
 foreground { s6-svwait -d -t 3000 uwsgi }
diff --git a/lxc-apps/sahana/image.d/etc/services.d/atd/run b/lxc-apps/sahana/image.d/etc/services.d/atd/run
new file mode 100755
index 0000000..6142dae
--- /dev/null
+++ b/lxc-apps/sahana/image.d/etc/services.d/atd/run
@@ -0,0 +1,3 @@
+#!/bin/execlineb -P
+
+atd -f
diff --git a/lxc-apps/sahana/image.d/etc/sudoers.d/sahana b/lxc-apps/sahana/image.d/etc/sudoers.d/sahana
new file mode 100644
index 0000000..0617737
--- /dev/null
+++ b/lxc-apps/sahana/image.d/etc/sudoers.d/sahana
@@ -0,0 +1 @@
+sahana ALL=(ALL) NOPASSWD:ALL
diff --git a/lxc-apps/sahana/image.d/tmp/compat.patch b/lxc-apps/sahana/image.d/tmp/compat.patch
deleted file mode 100644
index ebefe17..0000000
--- a/lxc-apps/sahana/image.d/tmp/compat.patch
+++ /dev/null
@@ -1,156 +0,0 @@
---- gluon/compileapp.py
-+++ gluon/compileapp.py
-@@ -61,7 +61,7 @@
- TEST_CODE = \
-     r"""
- def _TEST():
--    import doctest, sys, cStringIO, types, cgi, gluon.fileutils
-+    import doctest, sys, cStringIO, types, gluon.fileutils
-     if not gluon.fileutils.check_credentials(request):
-         raise HTTP(401, web2py_error='invalid credentials')
-     stdout = sys.stdout
---- gluon/globals.py
-+++ gluon/globals.py
-@@ -241,7 +241,15 @@
-         # parse POST variables on POST, PUT, BOTH only in post_vars
-         if body and not is_json and env.request_method in ('POST', 'PUT', 'DELETE', 'BOTH'):
-             query_string = env.pop('QUERY_STRING', None)
--            dpost = cgi.FieldStorage(fp=body, environ=env, keep_blank_values=1)
-+            content_disposition = env.get('HTTP_CONTENT_DISPOSITION')
-+            if content_disposition:
-+                headers = {'content-disposition': content_disposition,
-+                           'content-type': env['CONTENT_TYPE'],
-+                           'content-length': env['CONTENT_LENGTH'],
-+                           }
-+            else:
-+                headers = None
-+            dpost = cgi.FieldStorage(fp=body, environ=env, headers=headers, keep_blank_values=1)
-             try:
-                 post_vars.update(dpost)
-             except:
---- gluon/languages.py
-+++ gluon/languages.py
-@@ -16,7 +16,6 @@
- import sys
- import pkgutil
- import logging
--from cgi import escape
- from threading import RLock
- 
- from pydal._compat import copyreg, PY2, maketrans, iterkeys, unicodeT, to_unicode, to_bytes, iteritems, to_native, pjoin
---- gluon/packages/dal/pydal/_compat.py
-+++ gluon/packages/dal/pydal/_compat.py
-@@ -32,7 +32,6 @@
-     from urllib2 import urlopen
-     from string import maketrans
-     from types import ClassType
--    import cgi
-     import cookielib
-     from xmlrpclib import ProtocolError
-     BytesIO = StringIO
---- gluon/packages/dal/pydal/adapters/oracle.py
-+++ gluon/packages/dal/pydal/adapters/oracle.py
-@@ -96,7 +96,7 @@
-         return self.dialect.quote(tablename)
- 
-     def _build_value_for_insert(self, field, value, r_values):
--        if field.type is 'text':
-+        if field.type == 'text':
-             r_values[':' + field._rname] = self.expand(value, field.type)
-             return ':' + field._rname
-         return self.expand(value, field.type)
---- gluon/packages/dal/pydal/contrib/portalocker.py
-+++ gluon/packages/dal/pydal/contrib/portalocker.py
-@@ -193,6 +193,9 @@
-     def read(self, size=None):
-         return self.file.read() if size is None else self.file.read(size)
- 
-+    def readinto(self, b):
-+        b[:] = self.file.read()
-+
-     def readline(self):
-         return self.file.readline()
- 
---- gluon/packages/dal/pydal/dialects/postgre.py
-+++ gluon/packages/dal/pydal/dialects/postgre.py
-@@ -130,8 +130,8 @@
-         return rv
- 
-     def st_asgeojson(self, first, second, query_env={}):
--        return 'ST_AsGeoJSON(%s,%s,%s,%s)' % (
--            second['version'], self.expand(first, query_env=query_env),
-+        return 'ST_AsGeoJSON(%s,%s,%s)' % (
-+            self.expand(first, query_env=query_env),
-             second['precision'], second['options'])
- 
-     def st_astext(self, first, query_env={}):
-@@ -258,8 +258,8 @@
-         return 'ST_AsText(%s)' % self.expand(first, query_env=query_env)
-     
-     def st_asgeojson(self, first, second, query_env={}):
--        return 'ST_AsGeoJSON(%s,%s,%s,%s)' % (
--            second['version'], self.expand(first, query_env=query_env),
-+        return 'ST_AsGeoJSON(%s,%s,%s)' % (
-+            self.expand(first, query_env=query_env),
-             second['precision'], second['options'])
- 
-     def json_key(self, first, key, query_env=None):
---- gluon/packages/dal/pydal/helpers/classes.py
-+++ gluon/packages/dal/pydal/helpers/classes.py
-@@ -532,6 +532,9 @@
-         self.p += len(data)
-         return data
- 
-+    def readinto(self, bytes):
-+        return self.read(bytes)
-+
-     def readline(self):
-         i = self.data.find('\n', self.p)+1
-         if i > 0:
---- gluon/packages/dal/pydal/validators.py
-+++ gluon/packages/dal/pydal/validators.py
-@@ -148,7 +148,7 @@
- 
- 
- def validator_caller(func, value):
--    if getattr(func, 'validate', None) is Validator.validate:
-+    if getattr(func, 'validate', None) is not Validator.validate:
-         return func.validate(value)
-     value, error = func(value)
-     if error is not None:
-@@ -3154,7 +3154,7 @@
-                 if not all_special.count(True) >= self.special:
-                     failures.append(self.translator("Must include at least %s of the following: %s")
-                                     % (self.special, self.specials))
--            elif self.special is 0:
-+            elif self.special == 0 and self.special is not False:
-                 if len(all_special) > 0:
-                     failures.append(self.translator("May not contain any of the following: %s")
-                                     % self.specials)
-@@ -3169,7 +3169,7 @@
-                 if not len(all_upper) >= self.upper:
-                     failures.append(self.translator("Must include at least %s uppercase")
-                                     % str(self.upper))
--            elif self.upper is 0:
-+            elif self.upper == 0 and self.upper is not False:
-                 if len(all_upper) > 0:
-                     failures.append(
-                         self.translator("May not include any uppercase letters"))
-@@ -3179,7 +3179,7 @@
-                 if not len(all_lower) >= self.lower:
-                     failures.append(self.translator("Must include at least %s lowercase")
-                                     % str(self.lower))
--            elif self.lower is 0:
-+            elif self.lower == 0 and self.lower is not False:
-                 if len(all_lower) > 0:
-                     failures.append(
-                         self.translator("May not include any lowercase letters"))
-@@ -3192,7 +3192,7 @@
-                 if not len(all_number) >= self.number:
-                     failures.append(self.translator("Must include at least %s %s")
-                                     % (str(self.number), numbers))
--            elif self.number is 0:
-+            elif self.number == 0 and self.number is not False:
-                 if len(all_number) > 0:
-                     failures.append(self.translator("May not include any numbers"))
-         if len(failures) == 0:
diff --git a/lxc-apps/sahana/image.d/usr/local/bin/migrate b/lxc-apps/sahana/image.d/usr/local/bin/migrate
new file mode 100755
index 0000000..0aa881f
--- /dev/null
+++ b/lxc-apps/sahana/image.d/usr/local/bin/migrate
@@ -0,0 +1,13 @@
+#!/bin/sh
+
+# This is a compatible rewrite of https://github.com/sahana/eden_deploy/blob/master/roles/common/files/migrate specific for Alpine s6-based container
+
+# Migrate database
+cd /srv/web2py
+sed -i 's/settings.base.migrate = False/settings.base.migrate = True/g' applications/eden/models/000_config.py
+rm -rf applications/eden/compiled
+sudo -u sahana -- ./web2py.py -S eden -M -R applications/eden/static/scripts/tools/noop.py
+sed -i 's/settings.base.migrate = True/settings.base.migrate = False/g' applications/eden/models/000_config.py
+
+# Restart uwsgi
+s6-svc -t /etc/services.d/uwsgi
diff --git a/lxc-apps/sahana/install.sh b/lxc-apps/sahana/install.sh
index f1efd67..bd7d33c 100755
--- a/lxc-apps/sahana/install.sh
+++ b/lxc-apps/sahana/install.sh
@@ -5,7 +5,7 @@ set -ev
 POSTGRES_DATA="${VOLUMES_DIR}/sahana/postgres_data"
 SAHANA_DATA="${VOLUMES_DIR}/sahana/sahana_data"
 SAHANA_CONF="${VOLUMES_DIR}/sahana/sahana_conf"
-SAHANA_LAYER="${LAYERS_DIR}/sahana_0.0.1-200426"
+SAHANA_LAYER="${LAYERS_DIR}/sahana_1.0.3-200504"
 
 # Create Postgres instance
 install -o 105432 -g 105432 -m 700 -d ${POSTGRES_DATA}
diff --git a/lxc-apps/sambro/app b/lxc-apps/sambro/app
index 134f9df..aa7160e 100644
--- a/lxc-apps/sambro/app
+++ b/lxc-apps/sambro/app
@@ -1,5 +1,5 @@
 {
-    "version": "0.0.1-200426",
+    "version": "1.0.3-200504",
     "meta": {
         "title": "Sahana Eden - SAMBRO",
         "desc-cs": "Řízení humanítární činnosti - Centrum hlášení a výstrah",
@@ -8,7 +8,7 @@
     },
     "containers": {
         "sambro": {
-            "image": "sahana_0.0.1-200426",
+            "image": "sahana_1.0.3-200504",
             "depends": [
                 "sambro-postgres"
             ],
diff --git a/lxc-apps/sambro/install.sh b/lxc-apps/sambro/install.sh
index 77791d5..31cac60 100755
--- a/lxc-apps/sambro/install.sh
+++ b/lxc-apps/sambro/install.sh
@@ -5,7 +5,7 @@ set -ev
 POSTGRES_DATA="${VOLUMES_DIR}/sambro/postgres_data"
 SAHANA_DATA="${VOLUMES_DIR}/sambro/sahana_data"
 SAHANA_CONF="${VOLUMES_DIR}/sambro/sahana_conf"
-SAHANA_LAYER="${LAYERS_DIR}/sahana_0.0.1-200426"
+SAHANA_LAYER="${LAYERS_DIR}/sahana_1.0.3-200504"
 
 # Create Postgres instance
 install -o 105432 -g 105432 -m 700 -d ${POSTGRES_DATA}
diff --git a/lxc-apps/share/app b/lxc-apps/share/app
index eff3467..5da5942 100644
--- a/lxc-apps/share/app
+++ b/lxc-apps/share/app
@@ -1,5 +1,5 @@
 {
-    "version": "0.0.1-200426",
+    "version": "1.0.3-200504",
     "meta": {
         "title": "Sahana Eden - SHARE",
         "desc-cs": "Řízení humanítární činnosti - Úleva a rehabilitace",
@@ -8,7 +8,7 @@
     },
     "containers": {
         "share": {
-            "image": "sahana_0.0.1-200426",
+            "image": "sahana_1.0.3-200504",
             "depends": [
                 "share-postgres"
             ],
diff --git a/lxc-apps/share/install.sh b/lxc-apps/share/install.sh
index f9bfb0d..5763bf4 100755
--- a/lxc-apps/share/install.sh
+++ b/lxc-apps/share/install.sh
@@ -5,7 +5,7 @@ set -ev
 POSTGRES_DATA="${VOLUMES_DIR}/share/postgres_data"
 SAHANA_DATA="${VOLUMES_DIR}/share/sahana_data"
 SAHANA_CONF="${VOLUMES_DIR}/share/sahana_conf"
-SAHANA_LAYER="${LAYERS_DIR}/sahana_0.0.1-200426"
+SAHANA_LAYER="${LAYERS_DIR}/sahana_1.0.3-200504"
 
 # Create Postgres instance
 install -o 105432 -g 105432 -m 700 -d ${POSTGRES_DATA}