Make GNU Health SPOC-compatible
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797e900268
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26
lxc-apps/gnuhealth/app
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26
lxc-apps/gnuhealth/app
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@ -0,0 +1,26 @@
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{
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"version": "3.6.3-200313",
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"meta": {
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"title": "GNU Health",
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"desc-cs": "Lékařské záznamy pacientů",
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"desc-en": "Medical records administration",
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"license": "GPL"
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},
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"containers": {
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"gnuhealth": {
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"image": "gnuhealth_3.6.3-200313",
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"depends": [
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"gnuhealth-postgres"
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],
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"mounts": {
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"gnuhealth/gnuhealth_conf": "srv/gnuhealth/gnuhealth/tryton/server/config"
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}
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},
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"gnuhealth-postgres": {
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"image": "postgres_12.2.0-200313",
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"mounts": {
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"gnuhealth/postgres_data": "var/lib/postgresql"
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}
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}
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}
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}
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@ -1,5 +1,5 @@
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IMAGE gnuhealth_3.4.1-190620
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FROM alpine3.9-python3.6_3.6.8-190620
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IMAGE gnuhealth_3.6.3-200313
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FROM alpine3.11-python3.8_3.8.2-200313
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RUN EOF
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# Install runtime dependencies
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@ -9,15 +9,8 @@ RUN EOF
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apk --no-cache add --virtual .deps build-base git libffi-dev libjpeg-turbo-dev libxml2-dev libxslt-dev ncurses npm patch postgresql-dev python3-dev sudo
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# Download GNU Health
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wget http://ftp.gnu.org/gnu/health/gnuhealth-3.4.1.tar.gz -O /tmp/gnuhealth.tgz
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tar xzf /tmp/gnuhealth.tgz -C /srv
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mv /srv/gnuhealth-3.4.1 /srv/install
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# Hackfix python-barcode support (will work in 3.4.2 - see http://hg.savannah.gnu.org/hgweb/health/rev/61b7bc7b1a78)
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sed -i 's/pybarcode/python-barcode/' /srv/install/gnuhealth-setup
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# Clone Sao (Tryton web client) repository
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git clone -b 4.6 --single-branch --depth 1 https://github.com/tryton/sao /srv/gnuhealth/sao
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wget http://ftp.gnu.org/gnu/health/gnuhealth-3.6.3.tar.gz -O - | tar xzf - -C /srv
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mv /srv/gnuhealth-* /srv/install
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# Create OS user
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addgroup -S -g 8080 gnuhealth
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@ -31,11 +24,10 @@ RUN EOF
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# Create symlink for the current version of trytond
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ln -s /srv/gnuhealth/gnuhealth/tryton/server/trytond-* /srv/gnuhealth/gnuhealth/tryton/server/trytond-current
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# Hackfix extraneous pymongo requirement
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sed -i '/pymongo/d' /srv/gnuhealth/gnuhealth/tryton/server/modules/health_federation/health_federation.py
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# Hackfix template1 database lock
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sed -i 's/template1/gnuhealth/g' /srv/gnuhealth/gnuhealth/tryton/server/trytond-current/trytond/backend/postgresql/database.py
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# Clone Sao (Tryton web client) repository
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# Note: Sao version needs to be the same as Tryton version installed by GNU Health
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git clone -b 5.0 --single-branch --depth 1 https://github.com/tryton/sao /srv/gnuhealth/sao
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chown -R gnuhealth:gnuhealth /srv/gnuhealth/sao
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# Install Sao (Tryton web client) dependencies
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cd /srv/gnuhealth/sao
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@ -43,18 +35,17 @@ RUN EOF
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sudo -u gnuhealth ./node_modules/grunt-cli/bin/grunt
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# Download Demo database
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wget http://health.gnu.org/downloads/postgres_dumps/gnuhealth-34-demo.sql.gz -O /srv/gnuhealth/gnuhealth_demo.sql.gz
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wget http://health.gnu.org/downloads/postgres_dumps/gnuhealth-36-demo.sql.gz -O /srv/gnuhealth/gnuhealth_demo.sql.gz
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# Cleanup
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apk --no-cache del .deps
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find /srv/gnuhealth -name '.git*' -exec rm -rf {} +
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rm -rf /srv/install
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rm -f /tmp/gnuhealth.tgz
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EOF
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ENV PATH /srv/gnuhealth/gnuhealth/tryton/server/trytond-current/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
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ENV TRYTOND_CONFIG /srv/gnuhealth/gnuhealth/tryton/server/config/trytond.conf
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ENV PYTHONPATH /srv/gnuhealth/gnuhealth/tryton/server/trytond-current:/srv/gnuhealth/gnuhealth/tryton/server/config
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USER 8080 8080
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CMD trytond --verbose
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USER gnuhealth
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CMD /srv/gnuhealth/gnuhealth/tryton/server/trytond-current/bin/trytond --verbose
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@ -1,38 +1,38 @@
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#!/bin/sh
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set -ev
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# Volumes
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POSTGRES_DATA="${VOLUMES_DIR}/gnuhealth/postgres_data"
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GNUHEALTH_CONF="${VOLUMES_DIR}/gnuhealth/gnuhealth_conf"
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# Create Postgres instance
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mkdir -p /srv/gnuhealth/postgres_data
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chown -R 105432:105432 /srv/gnuhealth/postgres_data
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chmod 700 /srv/gnuhealth/postgres_data
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lxc-execute -n gnuhealth-postgres -- initdb -D /var/lib/postgresql
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install -o 105432 -g 105432 -m 700 -d ${POSTGRES_DATA}
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spoc-container exec gnuhealth-postgres -- initdb -D /var/lib/postgresql
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# Configure Postgres
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cp postgres_data/postgresql.conf /srv/gnuhealth/postgres_data/postgresql.conf
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cp postgres_data/pg_hba.conf /srv/gnuhealth/postgres_data/pg_hba.conf
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install -o 105432 -g 105432 -m 600 postgres_data/postgresql.conf ${POSTGRES_DATA}/postgresql.conf
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install -o 105432 -g 105432 -m 600 postgres_data/pg_hba.conf ${POSTGRES_DATA}/pg_hba.conf
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# Create databases
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export GNUHEALTH_PWD=$(head -c 18 /dev/urandom | base64 | tr -d '+/=')
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service lxc-gnuhealth-postgres start
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envsubst <createdb.sql | lxc-attach -u 5432 -g 5432 gnuhealth-postgres -- psql
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spoc-container start gnuhealth-postgres
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envsubst <createdb.sql | spoc-container exec gnuhealth-postgres -- psql
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# Configure GNU Health
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mkdir -p /srv/gnuhealth/gnuhealth_conf/
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envsubst <gnuhealth_conf/trytond.conf >/srv/gnuhealth/gnuhealth_conf/trytond.conf
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install -o 108080 -g 108080 -m 750 -d ${GNUHEALTH_CONF}
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envsubst <gnuhealth_conf/trytond.conf | install -o 108080 -g 108080 -m 640 /dev/stdin ${GNUHEALTH_CONF}/trytond.conf
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# Populate database
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export GNUHEALTH_ADMIN_USER="admin"
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export GNUHEALTH_ADMIN_EMAIL="admin@example.com"
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export GNUHEALTH_ADMIN_PWD=$(head -c 12 /dev/urandom | base64 | tr -d '+/=')
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lxc-execute gnuhealth -- sh -c "echo ${GNUHEALTH_ADMIN_PWD} >/tmp/.adminpwd; TRYTONPASSFILE=/tmp/.adminpwd trytond-admin -d gnuhealth --all -v; rm /tmp/.adminpwd"
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spoc-container exec gnuhealth -- sh -c "echo ${GNUHEALTH_ADMIN_PWD} >/tmp/.adminpwd; TRYTONPASSFILE=/tmp/.adminpwd trytond-admin -d gnuhealth --email ${GNUHEALTH_ADMIN_EMAIL} --all -v; rm /tmp/.adminpwd"
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# Populate demo database
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lxc-execute gnuhealth -- zcat /srv/gnuhealth/gnuhealth_demo.sql.gz | lxc-attach -u 5432 -g 5432 gnuhealth-postgres -- sh -c "PGPASSWORD=${GNUHEALTH_PWD} psql gnuhealth_demo gnuhealth"
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# Install config update script
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cp update-conf.sh /srv/gnuhealth/update-conf.sh
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spoc-container exec gnuhealth -- zcat /srv/gnuhealth/gnuhealth_demo.sql.gz | spoc-container exec gnuhealth-postgres -- sh -c "PGPASSWORD=${GNUHEALTH_PWD} psql gnuhealth_demo gnuhealth"
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# Stop services required for setup
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service lxc-gnuhealth-postgres stop
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spoc-container stop gnuhealth-postgres
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# Register application
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vmmgr register-app gnuhealth gh "${GNUHEALTH_ADMIN_USER}" "${GNUHEALTH_ADMIN_PWD}"
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@ -1,26 +0,0 @@
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{
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"version": "3.4.1-190620",
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"meta": {
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"title": "GNU Health",
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"desc-cs": "Lékařské záznamy pacientů",
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"desc-en": "Medical records administration",
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"license": "GPL"
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},
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"containers": {
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"gnuhealth": {
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"image": "gnuhealth_3.4.1-190620",
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"depends": [
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"gnuhealth-postgres"
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],
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"mounts": [
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["DIR", "/srv/gnuhealth/gnuhealth_conf", "/srv/gnuhealth/gnuhealth/tryton/server/config"]
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]
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},
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"gnuhealth-postgres": {
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"image": "postgres_11.3.0-190620",
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"mounts": [
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["DIR", "/srv/gnuhealth/postgres_data", "/var/lib/postgresql"]
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]
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}
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}
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}
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@ -2,7 +2,7 @@
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set -ev
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# Remove persistent data
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rm -rf /srv/gnuhealth
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rm -rf "${VOLUMES_DIR}/gnuhealth"
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# Unregister application
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vmmgr unregister-app gnuhealth
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